rs1799989
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;C) | 0.5 | benign most likely |
(C;C) | 0 | common in clinvar |
Make rs1799989(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 89177755 |
Gene | LOC107984363, TYR |
is a | snp |
is | mentioned by |
dbSNP | rs1799989 |
dbSNP (classic) | rs1799989 |
ClinGen | rs1799989 |
ebi | rs1799989 |
HLI | rs1799989 |
Exac | rs1799989 |
Gnomad | rs1799989 |
Varsome | rs1799989 |
LitVar | rs1799989 |
Map | rs1799989 |
PheGenI | rs1799989 |
Biobank | rs1799989 |
1000 genomes | rs1799989 |
hgdp | rs1799989 |
ensembl | rs1799989 |
geneview | rs1799989 |
scholar | rs1799989 |
rs1799989 | |
pharmgkb | rs1799989 |
gwascentral | rs1799989 |
openSNP | rs1799989 |
23andMe | rs1799989 |
SNPshot | rs1799989 |
SNPdbe | rs1799989 |
MSV3d | rs1799989 |
GWAS Ctlg | rs1799989 |
GMAF | 0.1694 |
Max Magnitude | 0.5 |
? | (A;A) (A;C) (C;C) | 28 |
---|---|---|
|
[PMID 18855532] among 120 (likely Japanese) first-episode neuroleptic-naive schizophrenics treated with risperidone genotyped for 30 variants in misc. dopamine and serotonin (receptors and otherwise) two SNPs in DRD2 (rs1799989 and rs1800497) and two SNPs in AKT1 (rs3803300 and rs2494732) were significant predictors of treatment response to risperidone
ClinVar | |
---|---|
Risk | rs1799989(A;A) |
Alt | rs1799989(A;A) |
Reference | Rs1799989(C;C) |
Significance | Non-pathogenic |
Disease | Tyrosinase-negative oculocutaneous albinism not provided |
Variation | info |
Gene | TYR |
CLNDBN | Tyrosinase-negative oculocutaneous albinism not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.88910923C>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000003986.4, RCV000085882.1, |
[PMID 17999355] A genomewide association study of skin pigmentation in a South Asian population.