rs1800449

minus

Geno	Mag	Summary
(G;G)	0	common in clinvar

Make rs1800449(A;A)

Make rs1800449(A;G)

Reference

GRCh38 38.1/142

Chromosome

5

Position

122077513

Gene

LOX

is a	snp
is	mentioned by
dbSNP	rs1800449
dbSNP (classic)	rs1800449
ClinGen	rs1800449
ebi	rs1800449
HLI	rs1800449
Exac	rs1800449
Gnomad	rs1800449
Varsome	rs1800449
LitVar	rs1800449
Map	rs1800449
PheGenI	rs1800449
Biobank	rs1800449
1000 genomes	rs1800449
hgdp	rs1800449
ensembl	rs1800449
geneview	rs1800449
scholar	rs1800449
google	rs1800449
pharmgkb	rs1800449
gwascentral	rs1800449
openSNP	rs1800449
23andMe	rs1800449
SNPshot	rs1800449
SNPdbe	rs1800449
MSV3d	rs1800449
GWAS Ctlg	rs1800449

GMAF

0.1667

Max Magnitude

0

?

(A;A) (A;G) (G;G)

28

OMIM	153455
Desc	LYSYL OXIDASE POLYMORPHISM
Variant	0001
Related	also

[PMID 19654310 ] A Loss-of-Function Polymorphism in the Propeptide Domain of the LOX Gene and Breast Cancer

[PMID 20929399] Lysyl Oxidase 473 G>A Polymorphism and Breast Cancer Susceptibility in Chinese Han Population

[PMID 22533780] Lysyl Oxidase G473A Polymorphism Is Associated with Increased Risk of Ovarian Cancer

[PMID 22661479 ] Variation in the Lysyl Oxidase (LOX) Gene Is Associated with Keratoconus in Family-Based and Case-Control Studies

ClinVar
Risk	rs1800449(A;A)
Alt	rs1800449(A;A)
Reference	Rs1800449(G;G)
Significance	Non-pathogenic
Disease	LYSYL OXIDASE POLYMORPHISM
Variation	info
Gene	LOX
CLNDBN	LYSYL OXIDASE POLYMORPHISM
Reversed	1
HGVS	NC_000005.9:g.121413208C>T
CLNSRC	OMIM Allelic Variant UniProtKB (protein)
CLNACC	RCV000015437.2,

[PMID 21995629] Lysyl oxidase G473A polymorphism is closely associated with susceptibility to gastric cancer in a South Korean population.

[PMID 22722997] Lysyl oxidase polymorphisms and ischemic stroke--a case control study.

[PMID 25141126 ] Association of the G473A Polymorphism and Expression of Lysyl Oxidase with Breast Cancer Risk and Survival in European Women: A Hospital-Based Case-Control Study

[PMID 32165300] LOX gene polymorphisms are associated with osteoporotic vertebral compression fracture in postmenopausal Chinese women.