rs1980493
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common on affy axiom data |
| Make rs1980493(A;G) |
| Make rs1980493(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32395438 |
| Gene | BTNL2, LOC101929163 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1980493 |
| dbSNP (classic) | rs1980493 |
| ClinGen | rs1980493 |
| ebi | rs1980493 |
| HLI | rs1980493 |
| Exac | rs1980493 |
| Gnomad | rs1980493 |
| Varsome | rs1980493 |
| LitVar | rs1980493 |
| Map | rs1980493 |
| PheGenI | rs1980493 |
| Biobank | rs1980493 |
| 1000 genomes | rs1980493 |
| hgdp | rs1980493 |
| ensembl | rs1980493 |
| geneview | rs1980493 |
| scholar | rs1980493 |
| rs1980493 | |
| pharmgkb | rs1980493 |
| gwascentral | rs1980493 |
| openSNP | rs1980493 |
| 23andMe | rs1980493 |
| SNPshot | rs1980493 |
| SNPdbe | rs1980493 |
| MSV3d | rs1980493 |
| GWAS Ctlg | rs1980493 |
| GMAF | 0.08907 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19287509 ]
|
| Trait | Anti-cyclic Citrullianted Peptide Antibody |
| Title | Genome Wide Association Study of Determinants of Anti-cyclic Citrullinated Peptide Antibody Titer in Adults with Rheumatoid Arthritis |
| Risk Allele | |
| P-val | 5E-7 |
| Odds Ratio | NR NR |
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
[PMID 20018075] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
