rs3905000

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(G;G)	0	common in complete genomics

Make rs3905000(A;A)

Make rs3905000(A;G)

Reference

GRCh38 38.1/141

Chromosome

9

Position

104894789

Gene

ABCA1

is a	snp
is	mentioned by
dbSNP	rs3905000
dbSNP (classic)	rs3905000
ClinGen	rs3905000
ebi	rs3905000
HLI	rs3905000
Exac	rs3905000
Gnomad	rs3905000
Varsome	rs3905000
LitVar	rs3905000
Map	rs3905000
PheGenI	rs3905000
Biobank	rs3905000
1000 genomes	rs3905000
hgdp	rs3905000
ensembl	rs3905000
geneview	rs3905000
scholar	rs3905000
google	rs3905000
pharmgkb	rs3905000
gwascentral	rs3905000
openSNP	rs3905000
23andMe	rs3905000
SNPshot	rs3905000
SNPdbe	rs3905000
MSV3d	rs3905000
GWAS Ctlg	rs3905000

GMAF

0.1327

Max Magnitude

0

?	(A;A) (A;G) (G;G)	28

GWAS snp
PMID	[PMID 19060911]
Trait	HDL cholesterol
Title	Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts
Risk Allele	G
P-val	9E-13
Odds Ratio	0.11 [NR] SD increase

GWAS snp
PMID	[PMID 21116278]
Trait
Title	Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease
Risk Allele
P-val	0.000009
Odds Ratio	0.0126 [NR] unit increase (interaction)

[PMID 19041386] Genetic-epidemiological evidence on genes associated with HDL cholesterol levels: a systematic in-depth review.

[PMID 19951432] Analysis of recently identified dyslipidemia alleles reveals two loci that contribute to risk for carotid artery disease.

[PMID 20502693] Genetics and beyond--the transcriptome of human monocytes and disease susceptibility.

[PMID 21347282] Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.