rs10771399
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs10771399(A;A) |
| Make rs10771399(A;G) |
| Make rs10771399(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 28002147 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10771399 |
| dbSNP (classic) | rs10771399 |
| ClinGen | rs10771399 |
| ebi | rs10771399 |
| HLI | rs10771399 |
| Exac | rs10771399 |
| Gnomad | rs10771399 |
| Varsome | rs10771399 |
| LitVar | rs10771399 |
| Map | rs10771399 |
| PheGenI | rs10771399 |
| Biobank | rs10771399 |
| 1000 genomes | rs10771399 |
| hgdp | rs10771399 |
| ensembl | rs10771399 |
| geneview | rs10771399 |
| scholar | rs10771399 |
| rs10771399 | |
| pharmgkb | rs10771399 |
| gwascentral | rs10771399 |
| openSNP | rs10771399 |
| 23andMe | rs10771399 |
| SNPshot | rs10771399 |
| SNPdbe | rs10771399 |
| MSV3d | rs10771399 |
| GWAS Ctlg | rs10771399 |
| GMAF | 0.1019 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 22348646
] Common variants at 12p11, 12q24, 9p21, 9q31.2 and in ZNF365 are associated with breast cancer risk for BRCA1 and/or BRCA2 mutation carriers
[PMID 22267197] Genome-wide association analysis identifies three new breast cancer susceptibility loci
| GWAS snp | |
|---|---|
| PMID | [PMID 23544013]
|
| Trait | Breast Cancer in BRCA1 mutation carriers |
| Title | Genome-wide association study in BRCA1 mutation carriers identifies novel loci associated with breast and ovarian cancer risk. |
| Risk Allele | A |
| P-val | 8E-6 |
| Odds Ratio | 1.18 [1.1-1.27] |
| GWAS snp | |
|---|---|
| PMID | [PMID 23535733]
|
| Trait | Breast cancer |
| Title | Genome-wide association studies identify four ER negative-specific breast cancer risk loci. |
| Risk Allele | T |
| P-val | 2E-12 |
| Odds Ratio | 1.20 [1.15-1.27] |
| GWAS snp | |
|---|---|
| PMID | [PMID 23535729]
|
| Trait | Breast cancer |
| Title | Large-scale genotyping identifies 41 new loci associated with breast cancer risk. |
| Risk Allele | A |
| P-val | 8E-31 |
| Odds Ratio | 1.16 [1.14-1.2] |
| GWAS snp | |
|---|---|
| PMID | [PMID 24325915]
|
| Trait | Breast cancer (estrogen-receptor negative, progesterone-receptor negative, and human epidermal growth factor-receptor negative) |
| Title | Genome-wide association study identifies 25 known breast cancer susceptibility loci as risk factors for triple-negative breast cancer. |
| Risk Allele | G |
| P-val | 2E-8 |
| Odds Ratio | 1.39 [1.25-1.56] |
[PMID 27459855] Identification of independent association signals and putative functional variants for breast cancer risk through fine-scale mapping of the 12p11 locus.
