rs12153855
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs12153855(C;C) |
Make rs12153855(C;T) |
Make rs12153855(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 32107027 |
Gene | TNXB |
is a | snp |
is | mentioned by |
dbSNP | rs12153855 |
dbSNP (classic) | rs12153855 |
ClinGen | rs12153855 |
ebi | rs12153855 |
HLI | rs12153855 |
Exac | rs12153855 |
Gnomad | rs12153855 |
Varsome | rs12153855 |
LitVar | rs12153855 |
Map | rs12153855 |
PheGenI | rs12153855 |
Biobank | rs12153855 |
1000 genomes | rs12153855 |
hgdp | rs12153855 |
ensembl | rs12153855 |
geneview | rs12153855 |
scholar | rs12153855 |
rs12153855 | |
pharmgkb | rs12153855 |
gwascentral | rs12153855 |
openSNP | rs12153855 |
23andMe | rs12153855 |
SNPshot | rs12153855 |
SNPdbe | rs12153855 |
MSV3d | rs12153855 |
GWAS Ctlg | rs12153855 |
GMAF | 0.1097 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 22694956] |
Trait | |
Title | Genome-wide association study of age-related macular degeneration identifies associated variants in the TNXB-FKBPL-NOTCH4 region of chromosome 6p21.3. |
Risk Allele | C |
P-val | 1E-9 |
Odds Ratio | 1.4400 None |
GWAS snp | |
---|---|
PMID | [PMID 23886662] |
Trait | Atopic dermatitis |
Title | A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis. |
Risk Allele | T |
P-val | 3E-14 |
Odds Ratio | 1.58 [1.405-1.779] |
[PMID 15747258] A high-resolution linkage-disequilibrium map of the human major histocompatibility complex and first generation of tag single-nucleotide polymorphisms.