rs12447690
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs12447690(C;C) |
| Make rs12447690(C;T) |
| Make rs12447690(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 88264518 |
| Gene | LOC107984862 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs12447690 |
| dbSNP (classic) | rs12447690 |
| ClinGen | rs12447690 |
| ebi | rs12447690 |
| HLI | rs12447690 |
| Exac | rs12447690 |
| Gnomad | rs12447690 |
| Varsome | rs12447690 |
| LitVar | rs12447690 |
| Map | rs12447690 |
| PheGenI | rs12447690 |
| Biobank | rs12447690 |
| 1000 genomes | rs12447690 |
| hgdp | rs12447690 |
| ensembl | rs12447690 |
| geneview | rs12447690 |
| scholar | rs12447690 |
| rs12447690 | |
| pharmgkb | rs12447690 |
| gwascentral | rs12447690 |
| openSNP | rs12447690 |
| 23andMe | rs12447690 |
| SNPshot | rs12447690 |
| SNPdbe | rs12447690 |
| MSV3d | rs12447690 |
| GWAS Ctlg | rs12447690 |
| GMAF | 0.4128 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20485516 ]
|
| Trait | Central corneal thickness |
| Title | Common genetic variants near the Brittle Cornea Syndrome locus ZNF469 influence the blinding disease risk factor central corneal thickness |
| Risk Allele | C |
| P-val | 9E-11 |
| Odds Ratio | 0.16 [0.10-0.22] unit increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 20719862] |
| Trait | |
| Title | New loci associated with central cornea thickness include COL5A1, AKAP13 and AVGR8 |
| Risk Allele | G |
| P-val | 6E-22 |
| Odds Ratio | 0.16 [0.13-0.19] unit decrease |
[PMID 21098505] Collagen related genes influence glaucoma risk factor, central corneal thickness
[PMID 22661486] Genome-wide Analysis of Central Corneal Thickness in Primary Open-angle Glaucoma Cases in the NEIGHBOR and GLAUGEN consortia
