rs12506899
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs12506899(G;G) |
| Make rs12506899(G;T) |
| Make rs12506899(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 73453566 |
| Gene | AFP |
| is a | snp |
| is | mentioned by |
| dbSNP | rs12506899 |
| dbSNP (classic) | rs12506899 |
| ClinGen | rs12506899 |
| ebi | rs12506899 |
| HLI | rs12506899 |
| Exac | rs12506899 |
| Gnomad | rs12506899 |
| Varsome | rs12506899 |
| LitVar | rs12506899 |
| Map | rs12506899 |
| PheGenI | rs12506899 |
| Biobank | rs12506899 |
| 1000 genomes | rs12506899 |
| hgdp | rs12506899 |
| ensembl | rs12506899 |
| geneview | rs12506899 |
| scholar | rs12506899 |
| rs12506899 | |
| pharmgkb | rs12506899 |
| gwascentral | rs12506899 |
| openSNP | rs12506899 |
| 23andMe | rs12506899 |
| SNPshot | rs12506899 |
| SNPdbe | rs12506899 |
| MSV3d | rs12506899 |
| GWAS Ctlg | rs12506899 |
| GMAF | 0.4086 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23300138] |
| Trait | Tumor biomarkers |
| Title | A genome wide association study of genetic loci that influence tumour biomarkers cancer antigen 19-9, carcinoembryonic antigen and α fetoprotein and their associations with cancer risk. |
| Risk Allele | G |
| P-val | 3E-18 |
| Odds Ratio | .07 [0.032-0.098] ng/ml decrease |
