rs1900004
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs1900004(A;A) |
| Make rs1900004(A;G) |
| Make rs1900004(G;G) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 10 |
| Position | 68241124 |
| Gene | LOC107984241 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1900004 |
| dbSNP (classic) | rs1900004 |
| ClinGen | rs1900004 |
| ebi | rs1900004 |
| HLI | rs1900004 |
| Exac | rs1900004 |
| Gnomad | rs1900004 |
| Varsome | rs1900004 |
| LitVar | rs1900004 |
| Map | rs1900004 |
| PheGenI | rs1900004 |
| Biobank | rs1900004 |
| 1000 genomes | rs1900004 |
| hgdp | rs1900004 |
| ensembl | rs1900004 |
| geneview | rs1900004 |
| scholar | rs1900004 |
| rs1900004 | |
| pharmgkb | rs1900004 |
| gwascentral | rs1900004 |
| openSNP | rs1900004 |
| 23andMe | rs1900004 |
| SNPshot | rs1900004 |
| SNPdbe | rs1900004 |
| MSV3d | rs1900004 |
| GWAS Ctlg | rs1900004 |
| GMAF | 0.3958 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20548946 ]
|
| Trait | Optic disc parameters |
| Title | A genome-wide association study of optic disc parameters |
| Risk Allele | T |
| P-val | 3E-35 |
| Odds Ratio | 0.07 [0.06-0.08] mm decrease |
[PMID 21398277] Genetic variants associated with optic nerve vertical cup-to-disc ratio are risk factors for primary open angle glaucoma in a US Caucasian population
[PMID 22222511] Interactive effects of ATOH7 and RFTN1 in association with adult-onset primary open angle glaucoma
[PMID 22584021] Association between Genetic Variants Associated with Vertical Cup-to-Disc Ratio and Phenotypic Features of Primary Open-Angle Glaucoma
[PMID 20395239] Genome-wide association identifies ATOH7 as a major gene determining human optic disc size.
[PMID 32933932] Genetic analysis of primary open-angle glaucoma-related risk alleles in a Korean population: the GLAU-GENDISK study.
