rs2523393
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs2523393(C;C) |
| Make rs2523393(C;T) |
| Make rs2523393(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 29737882 |
| Gene | HLA-F, HLA-F-AS1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2523393 |
| dbSNP (classic) | rs2523393 |
| ClinGen | rs2523393 |
| ebi | rs2523393 |
| HLI | rs2523393 |
| Exac | rs2523393 |
| Gnomad | rs2523393 |
| Varsome | rs2523393 |
| LitVar | rs2523393 |
| Map | rs2523393 |
| PheGenI | rs2523393 |
| Biobank | rs2523393 |
| 1000 genomes | rs2523393 |
| hgdp | rs2523393 |
| ensembl | rs2523393 |
| geneview | rs2523393 |
| scholar | rs2523393 |
| rs2523393 | |
| pharmgkb | rs2523393 |
| gwascentral | rs2523393 |
| openSNP | rs2523393 |
| 23andMe | rs2523393 |
| SNPshot | rs2523393 |
| SNPdbe | rs2523393 |
| MSV3d | rs2523393 |
| GWAS Ctlg | rs2523393 |
| GMAF | 0.3944 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19525953 ]
|
| Trait | Multiple sclerosis |
| Title | Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci |
| Risk Allele | A |
| P-val | 1E-17 |
| Odds Ratio | 1.28 [1.18-1.39] |
[PMID 20405052] The effect of single nucleotide polymorphisms from genome wide association studies in multiple sclerosis on gene expression.
[PMID 20593013] A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01.
[PMID 30245028] An Ancient Fecundability-Associated Polymorphism Creates a GATA2 Binding Site in a Distal Enhancer of HLA-F.
