rs2847297
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs2847297(A;A) |
Make rs2847297(A;G) |
Make rs2847297(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 18 |
Position | 12797695 |
Gene | PTPN2 |
is a | snp |
is | mentioned by |
dbSNP | rs2847297 |
dbSNP (classic) | rs2847297 |
ClinGen | rs2847297 |
ebi | rs2847297 |
HLI | rs2847297 |
Exac | rs2847297 |
Gnomad | rs2847297 |
Varsome | rs2847297 |
LitVar | rs2847297 |
Map | rs2847297 |
PheGenI | rs2847297 |
Biobank | rs2847297 |
1000 genomes | rs2847297 |
hgdp | rs2847297 |
ensembl | rs2847297 |
geneview | rs2847297 |
scholar | rs2847297 |
rs2847297 | |
pharmgkb | rs2847297 |
gwascentral | rs2847297 |
openSNP | rs2847297 |
23andMe | rs2847297 |
SNPshot | rs2847297 |
SNPdbe | rs2847297 |
MSV3d | rs2847297 |
GWAS Ctlg | rs2847297 |
GMAF | 0.3714 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 22446963] |
Trait | |
Title | Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population. |
Risk Allele | G |
P-val | 2E-8 |
Odds Ratio | 1.1000 None |
[PMID 24480412] PTPN2 rs1893217 single-nucleotide polymorphism is associated with risk of Behçet's disease in a Chinese Han population
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 18
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d