rs2900180
| Orientation | plus |
| Stabilized | plus |
| Make rs2900180(C;C) |
| Make rs2900180(C;T) |
| Make rs2900180(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 120944104 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2900180 |
| dbSNP (classic) | rs2900180 |
| ClinGen | rs2900180 |
| ebi | rs2900180 |
| HLI | rs2900180 |
| Exac | rs2900180 |
| Gnomad | rs2900180 |
| Varsome | rs2900180 |
| LitVar | rs2900180 |
| Map | rs2900180 |
| PheGenI | rs2900180 |
| Biobank | rs2900180 |
| 1000 genomes | rs2900180 |
| hgdp | rs2900180 |
| ensembl | rs2900180 |
| geneview | rs2900180 |
| scholar | rs2900180 |
| rs2900180 | |
| pharmgkb | rs2900180 |
| gwascentral | rs2900180 |
| openSNP | rs2900180 |
| 23andMe | rs2900180 |
| SNPshot | rs2900180 |
| SNPdbe | rs2900180 |
| MSV3d | rs2900180 |
| GWAS Ctlg | rs2900180 |
| GMAF | 0.3333 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
rs2900180 increases susceptibility to Rheumatoid Arthritis 1.34 times for carriers of the T allele [PMID 17804836
]
[PMID 19401279] Susceptibility variants for rheumatoid arthritis in the TRAF1-C5 and 6q23 loci: a meta-analysis
[PMID 19714643] TRAF1 polymorphisms associated with rheumatoid arthritis susceptibility in Asians and in Caucasians
[PMID 20219786] The role of rheumatoid arthritis genetic susceptibility markers in the prediction of erosive disease in patients with early inflammatory polyarthritis: results from the Norfolk Arthritis Register
[PMID 20018053] A genome-wide association scan for rheumatoid arthritis data by Hotelling's T2 tests
[PMID 18432273] STAT4 but not TRAF1/C5 variants influence the risk of developing rheumatoid arthritis and systemic lupus erythematosus in Colombians.
[PMID 18434327] Re-evaluation of putative rheumatoid arthritis susceptibility genes in the post-genome wide association study era and hypothesis of a key pathway underlying susceptibility.
[PMID 18648537] A large-scale rheumatoid arthritis genetic study identifies association at chromosome 9q33.2.
[PMID 19674979] Overlap of disease susceptibility loci for rheumatoid arthritis and juvenile idiopathic arthritis.
[PMID 19918040] Lack of association between TRAF1/C5 gene polymorphisms and biopsy-proven giant cell arteritis.
[PMID 20017967] Genome-wide association analyses of North American Rheumatoid Arthritis Consortium and Framingham Heart Study data utilizing genome-wide linkage results.
[PMID 20017974] Simultaneous analysis of all single-nucleotide polymorphisms in genome-wide association study of rheumatoid arthritis.
[PMID 20017985] Adjusting for HLA-DRbeta1 in a genome-wide association analysis of rheumatoid arthritis and related biomarkers.
[PMID 20017996] Effect of population stratification on the identification of significant single-nucleotide polymorphisms in genome-wide association studies.
[PMID 20018005] Analysis of genome-wide association data by large-scale Bayesian logistic regression.
[PMID 20018006] Case-control genome-wide association study of rheumatoid arthritis from Genetic Analysis Workshop 16 using penalized orthogonal-components regression-linear discriminant analysis.
[PMID 20018019] Two-stage joint selection method to identify candidate markers from genome-wide association studies.
[PMID 20018022] Replication of recently identified associated single-nucleotide polymorphisms from six autoimmune diseases in Genetic Analysis Workshop 16 rheumatoid arthritis data.
[PMID 20018028] Armitage's trend test for genome-wide association analysis: one-sided or two-sided?
[PMID 20018071] Allelic based gene-gene interactions in rheumatoid arthritis.
[PMID 20018075] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
[PMID 20018077] Incorporating biological knowledge in the search for gene x gene interaction in genome-wide association studies.
[PMID 20018087] Assessment of sex-specific effects in a genome-wide association study of rheumatoid arthritis.
[PMID 20018090] Comparative analysis of different approaches for dealing with candidate regions in the context of a genome-wide association study.
[PMID 20444755] Investigation of rheumatoid arthritis susceptibility genes identifies association of AFF3 and CD226 variants with response to anti-tumour necrosis factor treatment.
[PMID 22328738] Comprehensive assessment of rheumatoid arthritis susceptibility loci in a large psoriatic arthritis cohort.
[PMID 23242182] Investigation of rheumatoid arthritis genetic susceptibility markers in the early rheumatoid arthritis study further replicates the TRAF1 association with radiological damage.
[PMID 25566937] A genetic study on C5-TRAF1 and progression of joint damage in rheumatoid arthritis
