Have questions? Visit https://www.reddit.com/r/SNPedia

rs534870

From SNPedia

Orientationplus
Stabilizedplus
Make rs534870(A;A)
Make rs534870(A;G)
Make rs534870(G;G)
ReferenceGRCh38 38.1/141
Chromosome13
Position80385072
is asnp
is mentioned by
dbSNPrs534870
dbSNP (classic)rs534870
ClinGenrs534870
ebirs534870
HLIrs534870
Exacrs534870
Gnomadrs534870
Varsomers534870
LitVarrs534870
Maprs534870
PheGenIrs534870
Biobankrs534870
1000 genomesrs534870
hgdprs534870
ensemblrs534870
geneviewrs534870
scholarrs534870
googlers534870
pharmgkbrs534870
gwascentralrs534870
openSNPrs534870
23andMers534870
SNPshotrs534870
SNPdbers534870
MSV3drs534870
GWAS Ctlgrs534870
GMAF0.3159
Max Magnitude0

rs534870 associates with body fat percentage in individuals of European descent. The body fat percentage decreasing allele of rs534870 was modestly associated with decreased SPRY2 expression in whole blood (a critical regulator of adipose tissue differentiation in mice, [PMID 20410440OA-icon.png]). In contrast with the near-IRS1 locus, there was no association between rs534870 and SPRY2 expression in adipose tissue, brain or liver.

? (A;A) (A;G) (G;G) 28


GWAS snp
PMID [PMID 21706003OA-icon.png]
Trait
Title Genetic variation near IRS1 associates with reduced adiposity and an impaired metabolic profile.
Risk Allele A
P-val 7E-8
Odds Ratio 0.0300 [NR] % decrease


[PMID 23708086] NUDT3 rs206936 is associated with body mass index in obese Japanese women.


[PMID 30204480] Machine Learning-Based Method for Obesity Risk Evaluation Using Single-Nucleotide Polymorphisms Derived from Next-Generation Sequencing.