rs629301
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs629301(A;A) |
| Make rs629301(A;C) |
| Make rs629301(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 109275684 |
| Gene | CELSR2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs629301 |
| dbSNP (classic) | rs629301 |
| ClinGen | rs629301 |
| ebi | rs629301 |
| HLI | rs629301 |
| Exac | rs629301 |
| Gnomad | rs629301 |
| Varsome | rs629301 |
| LitVar | rs629301 |
| Map | rs629301 |
| PheGenI | rs629301 |
| Biobank | rs629301 |
| 1000 genomes | rs629301 |
| hgdp | rs629301 |
| ensembl | rs629301 |
| geneview | rs629301 |
| scholar | rs629301 |
| rs629301 | |
| pharmgkb | rs629301 |
| gwascentral | rs629301 |
| openSNP | rs629301 |
| 23andMe | rs629301 |
| SNPshot | rs629301 |
| SNPdbe | rs629301 |
| MSV3d | rs629301 |
| GWAS Ctlg | rs629301 |
| GMAF | 0.2135 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20686565 ]
|
| Trait | |
| Title | Biological, clinical and population relevance of 95 loci for blood lipids |
| Risk Allele | G |
| P-val | 0 |
| Odds Ratio | 5.65 [NR] unit decrease |
[PMID 18262040] LDL-cholesterol concentrations: a genome-wide association study.
[PMID 19913121] Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.
[PMID 20502693] Genetics and beyond--the transcriptome of human monocytes and disease susceptibility.
[PMID 23092954] SHAVE: shrinkage estimator measured for multiple visits increases power in GWAS of quantitative traits.
[PMID 23723249] GWAS3D: Detecting human regulatory variants by integrative analysis of genome-wide associations, chromosome interactions and histone modifications.
| GWAS snp | |
|---|---|
| PMID | [PMID 24097068]
|
| Trait | Cholesterol, total |
| Title | Discovery and refinement of loci associated with lipid levels. |
| Risk Allele | G |
| P-val | 2E-170 |
| Odds Ratio | .13 [NR] unit decrease |
