rs6698181
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs6698181(C;C) |
| Make rs6698181(C;T) |
| Make rs6698181(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 88677622 |
| Gene | PKN2-AS1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6698181 |
| dbSNP (classic) | rs6698181 |
| ClinGen | rs6698181 |
| ebi | rs6698181 |
| HLI | rs6698181 |
| Exac | rs6698181 |
| Gnomad | rs6698181 |
| Varsome | rs6698181 |
| LitVar | rs6698181 |
| Map | rs6698181 |
| PheGenI | rs6698181 |
| Biobank | rs6698181 |
| 1000 genomes | rs6698181 |
| hgdp | rs6698181 |
| ensembl | rs6698181 |
| geneview | rs6698181 |
| scholar | rs6698181 |
| rs6698181 | |
| pharmgkb | rs6698181 |
| gwascentral | rs6698181 |
| openSNP | rs6698181 |
| 23andMe | rs6698181 |
| SNPshot | rs6698181 |
| SNPdbe | rs6698181 |
| MSV3d | rs6698181 |
| GWAS Ctlg | rs6698181 |
| GMAF | 0.2975 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| Rs6698181 | |
|---|---|
| PubMed | [PMID 17463246] |
| Affy Probeset | SNP_A-2129780 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | C/T |
| Ancestral | C |
| Population | NEU |
| Allele | T |
| Case Freq. | |
| Control Freq. | 0.29 |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.11 |
| Disease | Type II Diabetes (T2D) |
rs6698181 increases susceptibility to Type II Diabetes 1.11 times for carriers of the T allele [PMID 17463246]
[PMID 18443202
] Association analysis in african americans of European-derived type 2 diabetes single nucleotide polymorphisms from whole-genome association studies.
[PMID 21084393] Type 2 diabetes (T2D) associated polymorphisms regulate expression of adjacent transcripts in transformed lymphocytes, adipose, and muscle from Caucasian and African-American subjects.
