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rs7871490

From SNPedia

Orientationplus
Stabilizedplus
Make rs7871490(G;G)
Make rs7871490(G;T)
Make rs7871490(T;T)
ReferenceGRCh38 38.1/141
Chromosome9
Position99151408
GeneTGFBR1
is asnp
is mentioned by
dbSNPrs7871490
dbSNP (classic)rs7871490
ClinGenrs7871490
ebirs7871490
HLIrs7871490
Exacrs7871490
Gnomadrs7871490
Varsomers7871490
LitVarrs7871490
Maprs7871490
PheGenIrs7871490
Biobankrs7871490
1000 genomesrs7871490
hgdprs7871490
ensemblrs7871490
geneviewrs7871490
scholarrs7871490
googlers7871490
pharmgkbrs7871490
gwascentralrs7871490
openSNPrs7871490
23andMers7871490
SNPshotrs7871490
SNPdbers7871490
MSV3drs7871490
GWAS Ctlgrs7871490
Max Magnitude0

10.1126 appears relevant to colon cancer rs334348, rs334349 and rs1590 (in total linkage disequilibrium with each other) and a fourth marker, rs7871490


[PMID 18703712OA-icon.png] Germline allele-specific expression of TGFBR1 confers an increased risk of colorectal cancer.


[PMID 20500843OA-icon.png] Constitutively decreased TGFBR1 allelic expression is a common finding in colorectal cancer and is associated with three TGFBR1 SNPs.


ClinVar
Risk rs7871490(G;G)
Alt rs7871490(G;G)
Reference rs7871490(T;T)
Significance Unknown
Disease Loeys-Dietz syndrome 1 Loeys-Dietz syndrome Thoracic aortic aneurysm and aortic dissection
Variation info
Gene TGFBR1
CLNDBN Loeys-Dietz syndrome 1 Loeys-Dietz syndrome Thoracic aortic aneurysm and aortic dissection
Reversed 0
HGVS NC_000009.11:g.101913690T>G
CLNSRC
CLNACC RCV000266960.1, RCV000307304.1, RCV000361934.1,