rs9275572
Orientation | plus |
Stabilized | plus |
Make rs9275572(A;A) |
Make rs9275572(A;G) |
Make rs9275572(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 32711222 |
is a | snp |
is | mentioned by |
dbSNP | rs9275572 |
dbSNP (classic) | rs9275572 |
ClinGen | rs9275572 |
ebi | rs9275572 |
HLI | rs9275572 |
Exac | rs9275572 |
Gnomad | rs9275572 |
Varsome | rs9275572 |
LitVar | rs9275572 |
Map | rs9275572 |
PheGenI | rs9275572 |
Biobank | rs9275572 |
1000 genomes | rs9275572 |
hgdp | rs9275572 |
ensembl | rs9275572 |
geneview | rs9275572 |
scholar | rs9275572 |
rs9275572 | |
pharmgkb | rs9275572 |
gwascentral | rs9275572 |
openSNP | rs9275572 |
23andMe | rs9275572 |
SNPshot | rs9275572 |
SNPdbe | rs9275572 |
MSV3d | rs9275572 |
GWAS Ctlg | rs9275572 |
GMAF | 0.3751 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 20596022] |
Trait | Alopecia areata |
Title | Genome-wide association study in alopecia areata implicates both innate and adaptive immunity |
Risk Allele | G |
P-val | 1E-35 |
Odds Ratio | 2.21 [1.98-2.47] |
GWAS snp | |
---|---|
PMID | [PMID 21499248] |
Trait | |
Title | Genome-wide association study identifies a susceptibility locus for HCV-induced hepatocellular carcinoma. |
Risk Allele | A |
P-val | 6E-9 |
Odds Ratio | 1.3000 [1.19-1.42] |
[PMID 17660530] Risk alleles for multiple sclerosis identified by a genomewide study.
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
[PMID 20018015] Elastic-net regularization approaches for genome-wide association studies of rheumatoid arthritis.
[PMID 20546594] An application of Random Forests to a genome-wide association dataset: methodological considerations & new findings.
[PMID 24357186] Molecular Evolution of Genetic Susceptibility to Hepatocellular Carcinoma
GWAS snp | |
---|---|
PMID | [PMID 24376798] |
Trait | Chronic hepatitis C infection |
Title | HLA-DQB1*03 confers susceptibility to chronic hepatitis C in Japanese: a genome-wide association study. |
Risk Allele | T |
P-val | 4E-16 |
Odds Ratio | 1.27 [1.19-1.33] |
[PMID 24204805] Replication of genome wide association studies on hepatocellular carcinoma susceptibility loci in a Chinese population
GWAS snp | |
---|---|
PMID | [PMID 24871463] |
Trait | Systemic lupus erythematosus |
Title | GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region. |
Risk Allele | A |
P-val | 5E-16 |
Odds Ratio | 1.74 [1.64-1.85] |
[PMID 27288300] Polymorphisms of HLA-DQB1 predict survival of hepatitis B virus-related hepatocellular carcinoma patients receiving hepatic resection.
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d