rs9533090

Orientation

plus

Stabilized

plus

Make rs9533090(C;C)

Make rs9533090(C;T)

Make rs9533090(T;T)

Reference

GRCh38 38.1/141

Chromosome

13

Position

42377313

is a	snp
is	mentioned by
dbSNP	rs9533090
dbSNP (classic)	rs9533090
ClinGen	rs9533090
ebi	rs9533090
HLI	rs9533090
Exac	rs9533090
Gnomad	rs9533090
Varsome	rs9533090
LitVar	rs9533090
Map	rs9533090
PheGenI	rs9533090
Biobank	rs9533090
1000 genomes	rs9533090
hgdp	rs9533090
ensembl	rs9533090
geneview	rs9533090
scholar	rs9533090
google	rs9533090
pharmgkb	rs9533090
gwascentral	rs9533090
openSNP	rs9533090
23andMe	rs9533090
SNPshot	rs9533090
SNPdbe	rs9533090
MSV3d	rs9533090
GWAS Ctlg	rs9533090

GMAF

0.3177

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

GWAS snp
PMID	[PMID 19801982]
Trait	Bone mineral density (spine)
Title	Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies
Risk Allele	T
P-val	5E-25
Odds Ratio	0.12 [0.10-0.14] sd decrease

OMIM	612110
Desc
Variant
Related	also

[PMID 22370887] Are bone mineral density loci associated with hip osteoporotic fractures? A validation study on previously reported genome-wide association loci in a Chinese population

GWAS snp
PMID	[PMID 22504420]
Trait
Title	Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
Risk Allele	T
P-val	5E-68
Odds Ratio	0.1000 None

GWAS snp
PMID	[PMID 24249740]
Trait	Bone mineral density
Title	Multistage genome-wide association meta-analyses identified two new loci for bone mineral density.
Risk Allele
P-val	3E-7
Odds Ratio	NR NR

[PMID 29528523] Multiple functional variants at 13q14 risk locus for osteoporosis regulate RANKL expression through long-range super-enhancer.