rs9989419

Orientation

plus

Stabilized

plus

Make rs9989419(A;A)

Make rs9989419(A;G)

Make rs9989419(G;G)

Reference

GRCh38 38.1/141

Chromosome

16

Position

56951227

is a	snp
is	mentioned by
dbSNP	rs9989419
dbSNP (classic)	rs9989419
ClinGen	rs9989419
ebi	rs9989419
HLI	rs9989419
Exac	rs9989419
Gnomad	rs9989419
Varsome	rs9989419
LitVar	rs9989419
Map	rs9989419
PheGenI	rs9989419
Biobank	rs9989419
1000 genomes	rs9989419
hgdp	rs9989419
ensembl	rs9989419
geneview	rs9989419
scholar	rs9989419
google	rs9989419
pharmgkb	rs9989419
gwascentral	rs9989419
openSNP	rs9989419
23andMe	rs9989419
SNPshot	rs9989419
SNPdbe	rs9989419
MSV3d	rs9989419
GWAS Ctlg	rs9989419

GMAF

0.3893

Max Magnitude

0

?	(A;A) (A;G) (G;G)	28

GWAS snp
PMID	[PMID 18193043]
Trait	HDL cholesterol
Title	Newly identified loci that influence lipid concentrations and risk of coronary artery disease
Risk Allele	G
P-val	2.9999999999999998E-31
Odds Ratio	1.72 [NR] mg/dl higher

GWAS snp
PMID	[PMID 20031538]
Trait	HDL cholesterol
Title	Genome-Wide Association Analysis of High-Density Lipoprotein Cholesterol in the Population-Based KORA Study Sheds New Light on Intergenic Regions
Risk Allele	A
P-val	9E-27
Odds Ratio	2.66 [NR] mg/dl decrease

GWAS snp
PMID	[PMID 20864672]
Trait
Title	Genetic Variants Influencing Circulating Lipid Levels and Risk of Coronary Artery Disease
Risk Allele	G
P-val	1E-32
Odds Ratio	0.04 [0.03-0.05] unit increase

[PMID 29234452] Genetic variations of cholesteryl ester transfer protein and diet interactions in relation to lipid profiles and coronary heart disease: a systematic review.

[PMID 18179892] Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.

[PMID 19041386] Genetic-epidemiological evidence on genes associated with HDL cholesterol levels: a systematic in-depth review.

[PMID 20018038] Evaluation of genetic risk scores for lipid levels using genome-wide markers in the Framingham Heart Study.

[PMID 20031564] Polymorphism in the CETP gene region, HDL cholesterol, and risk of future myocardial infarction: Genomewide analysis among 18 245 initially healthy women from the Women's Genome Health Study.

[PMID 20370913] Genome-wide association analysis of total cholesterol and high-density lipoprotein cholesterol levels using the Framingham heart study data.

[PMID 20694148] A genome-wide association study of the metabolic syndrome in Indian Asian men.

[PMID 24283500] CETP gene polymorphisms and risk of coronary atherosclerosis in a Chinese population

GWAS snp
PMID	[PMID 24023261]
Trait	Lipid traits
Title	THOC5: a novel gene involved in HDL-cholesterol metabolism.
Risk Allele	A
P-val	5E-11
Odds Ratio	6.57 unit decrease