rs7582141
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
Make rs7582141(G;T) |
Make rs7582141(T;T) |
Reference | GRCh38 38.1/142 |
Chromosome | 2 |
Position | 159042977 |
Gene | TANC1 |
is a | snp |
is | mentioned by |
dbSNP | rs7582141 |
dbSNP (classic) | rs7582141 |
ClinGen | rs7582141 |
ebi | rs7582141 |
HLI | rs7582141 |
Exac | rs7582141 |
Gnomad | rs7582141 |
Varsome | rs7582141 |
LitVar | rs7582141 |
Map | rs7582141 |
PheGenI | rs7582141 |
Biobank | rs7582141 |
1000 genomes | rs7582141 |
hgdp | rs7582141 |
ensembl | rs7582141 |
geneview | rs7582141 |
scholar | rs7582141 |
rs7582141 | |
pharmgkb | rs7582141 |
gwascentral | rs7582141 |
openSNP | rs7582141 |
23andMe | rs7582141 |
SNPshot | rs7582141 |
SNPdbe | rs7582141 |
MSV3d | rs7582141 |
GWAS Ctlg | rs7582141 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 24974847] |
Trait | Response to radiotherapy in prostate cancer (toxicity) |
Title | A three-stage genome-wide association study identifies a susceptibility locus for late radiotherapy toxicity at 2q24.1. |
Risk Allele | T |
P-val | 5E-11 |
Odds Ratio | .37 [NR] unit increase |
ClinVar | |
---|---|
Risk | rs7582141(T;T) |
Alt | rs7582141(T;T) |
Reference | Rs7582141(G;G) |
Significance | Drug-response |
Disease | radiotherapy response - Toxicity/ADR |
Variation | info |
Gene | TANC1 |
CLNDBN | radiotherapy response - Toxicity/ADR |
Reversed | 0 |
HGVS | NC_000002.11:g.159899489G>T |
CLNSRC | PharmGKB Clinical Annotation |
CLNACC | RCV000211418.1, |