rs16953002
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 1.5 | 1.32x increased risk of melanoma in those with low BMI |
(A;G) | 1.2 | 1.16x increased risk of melanoma in indiiduals with low BMI |
(G;G) | 1 | Slightly lower risk of melanoma in individuals with low BMI |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 54080912 |
Gene | FTO |
is a | snp |
is | mentioned by |
dbSNP | rs16953002 |
dbSNP (classic) | rs16953002 |
ClinGen | rs16953002 |
ebi | rs16953002 |
HLI | rs16953002 |
Exac | rs16953002 |
Gnomad | rs16953002 |
Varsome | rs16953002 |
LitVar | rs16953002 |
Map | rs16953002 |
PheGenI | rs16953002 |
Biobank | rs16953002 |
1000 genomes | rs16953002 |
hgdp | rs16953002 |
ensembl | rs16953002 |
geneview | rs16953002 |
scholar | rs16953002 |
rs16953002 | |
pharmgkb | rs16953002 |
gwascentral | rs16953002 |
openSNP | rs16953002 |
23andMe | rs16953002 |
SNPshot | rs16953002 |
SNPdbe | rs16953002 |
MSV3d | rs16953002 |
GWAS Ctlg | rs16953002 |
GMAF | 0.2057 |
Max Magnitude | 1.5 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 23455637] |
Trait | Melanoma |
Title | A variant in FTO shows association with melanoma risk not due to BMI. |
Risk Allele | A |
P-val | 4E-12 |
Odds Ratio | 1.16 [1.11-1.20] |