rs111033627
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 5 | Carrier of an X-linked mutation for lymphoproliferative syndrome 1 |
(T;T) | 8.8 | Lymphoproliferative syndrome 1 (predicted) |
Reference | GRCh38 38.1/141 |
Chromosome | X |
Position | 124370177 |
Gene | SH2D1A |
is a | snp |
is | mentioned by |
dbSNP | rs111033627 |
dbSNP (classic) | rs111033627 |
ClinGen | rs111033627 |
ebi | rs111033627 |
HLI | rs111033627 |
Exac | rs111033627 |
Gnomad | rs111033627 |
Varsome | rs111033627 |
LitVar | rs111033627 |
Map | rs111033627 |
PheGenI | rs111033627 |
Biobank | rs111033627 |
1000 genomes | rs111033627 |
hgdp | rs111033627 |
ensembl | rs111033627 |
geneview | rs111033627 |
scholar | rs111033627 |
rs111033627 | |
pharmgkb | rs111033627 |
gwascentral | rs111033627 |
openSNP | rs111033627 |
23andMe | rs111033627 |
SNPshot | rs111033627 |
SNPdbe | rs111033627 |
MSV3d | rs111033627 |
GWAS Ctlg | rs111033627 |
Max Magnitude | 8.8 |
aka c.203C>T (p.Thr68Ile)
considered pathogenic for X-linked Lymphoproliferative syndrome, type 1 in ClinVar
23andMe name: i5003044
ClinVar | |
---|---|
Risk | Rs111033627(T;T) |
Alt | Rs111033627(T;T) |
Reference | Rs111033627(C;C) |
Significance | Pathogenic |
Disease | Lymphoproliferative syndrome 1 |
Variation | info |
Gene | SH2D1A |
CLNDBN | Lymphoproliferative syndrome 1, X-linked |
Reversed | 0 |
HGVS | NC_000023.10:g.123504027C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000011652.9, |