rs11214077
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;G) | 1 | classified as benign variant in ClinVar |
(G;G) | 1 | most likely a benign genotype according to ClinVar (although rare) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 112087953 |
Gene | SDHD, TIMM8B |
is a | snp |
is | mentioned by |
dbSNP | rs11214077 |
dbSNP (classic) | rs11214077 |
ClinGen | rs11214077 |
ebi | rs11214077 |
HLI | rs11214077 |
Exac | rs11214077 |
Gnomad | rs11214077 |
Varsome | rs11214077 |
LitVar | rs11214077 |
Map | rs11214077 |
PheGenI | rs11214077 |
Biobank | rs11214077 |
1000 genomes | rs11214077 |
hgdp | rs11214077 |
ensembl | rs11214077 |
geneview | rs11214077 |
scholar | rs11214077 |
rs11214077 | |
pharmgkb | rs11214077 |
gwascentral | rs11214077 |
openSNP | rs11214077 |
23andMe | rs11214077 |
SNPshot | rs11214077 |
SNPdbe | rs11214077 |
MSV3d | rs11214077 |
GWAS Ctlg | rs11214077 |
GMAF | 0.009183 |
Max Magnitude | 1 |
aka c.149A>G, p.His50Arg or H50R
Classified as benign in ClinVar. Somewhat rare (~0.5%) allele frequency, but nowhere near as rare as the 1:100,000 incidence of the rare cancers cited in the OMIM entry for this variant.
ClinVar | |
---|---|
Risk | Rs11214077(G;G) |
Alt | Rs11214077(G;G) |
Reference | Rs11214077(A;A) |
Significance | Other |
Disease | Carcinoid tumor of intestine Pheochromocytoma Merkel cell carcinoma not provided not specified Hereditary cancer-predisposing syndrome Cowden syndrome 3 Paraganglioma and gastric stromal sarcoma Paragangliomas 1 |
Variation | info |
Gene | TIMM8B SDHD |
CLNDBN | Carcinoid tumor of intestine Pheochromocytoma Merkel cell carcinoma not provided not specified Hereditary cancer-predisposing syndrome Cowden syndrome 3 Paraganglioma and gastric stromal sarcoma Paragangliomas 1 |
Reversed | 0 |
HGVS | NC_000011.9:g.111958677A>G |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000007318.5, RCV000023207.6, RCV000023208.7, RCV000034696.1, RCV000122007.2, RCV000129149.2, RCV000144513.3, RCV000204331.3, RCV000238643.1, |