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rs11747270

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 0 common in complete genomics
Make rs11747270(A;G)
Make rs11747270(G;G)
ReferenceGRCh38 38.1/141
Chromosome5
Position150879305
GeneIRGM
is asnp
is mentioned by
dbSNPrs11747270
dbSNP (classic)rs11747270
ClinGenrs11747270
ebirs11747270
HLIrs11747270
Exacrs11747270
Gnomadrs11747270
Varsomers11747270
LitVarrs11747270
Maprs11747270
PheGenIrs11747270
Biobankrs11747270
1000 genomesrs11747270
hgdprs11747270
ensemblrs11747270
geneviewrs11747270
scholarrs11747270
googlers11747270
pharmgkbrs11747270
gwascentralrs11747270
openSNPrs11747270
23andMers11747270
SNPshotrs11747270
SNPdbers11747270
MSV3drs11747270
GWAS Ctlgrs11747270
GMAF0.2828
Max Magnitude0
? (A;A) (A;G) (G;G) 28


GWAS snp
PMID [PMID 18587394OA-icon.png]
Trait Crohn's disease
Title Genome-wide assocation defines more than 30 distinct susceptibility loci for Crohn's disease
Risk Allele G
P-val 2.9999999999999999E-16
Odds Ratio 1.33 [NR]
OMIM612278
DescINFLAMMATORY BOWEL DISEASE 19; IBD19
Variant
Relatedalso


[PMID 19557189OA-icon.png] Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions.


[PMID 20106866OA-icon.png] Independent and population-specific association of risk variants at the IRGM locus with Crohn's disease.


[PMID 22065112] The JAK2 variant rs10758669 in Crohn's disease: altering the intestinal barrier as one mechanism of action.


[PMID 31654602] Genetic Polymorphisms of ATG16L1 and IRGM genes in Malaysian Patients with Crohn's Disease.