rs118192178
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;G) | 3 | malignant hyperthermia |
(C;T) | 3 | malignant hyperthermia |
Make rs118192178(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 19 |
Position | 38500898 |
Gene | RYR1 |
is a | snp |
is | mentioned by |
dbSNP | rs118192178 |
dbSNP (classic) | rs118192178 |
ClinGen | rs118192178 |
ebi | rs118192178 |
HLI | rs118192178 |
Exac | rs118192178 |
Gnomad | rs118192178 |
Varsome | rs118192178 |
LitVar | rs118192178 |
Map | rs118192178 |
PheGenI | rs118192178 |
Biobank | rs118192178 |
1000 genomes | rs118192178 |
hgdp | rs118192178 |
ensembl | rs118192178 |
geneview | rs118192178 |
scholar | rs118192178 |
rs118192178 | |
pharmgkb | rs118192178 |
gwascentral | rs118192178 |
openSNP | rs118192178 |
23andMe | rs118192178 |
SNPshot | rs118192178 |
SNPdbe | rs118192178 |
MSV3d | rs118192178 |
GWAS Ctlg | rs118192178 |
Max Magnitude | 3 |
aka c.7522C>T (p.Arg2508Cys or R2508C) and also c.7522C>G (p.Arg2508Gly or R2508G), both of which are considered pathogenic in either ClinVar and/or the RYR1-based database
23andMe name for c.7522C>T: i6017673
ClinVar | |
---|---|
Risk | rs118192178(G;G) rs118192178(T;T) |
Alt | rs118192178(G;G) rs118192178(T;T) |
Reference | Rs118192178(C;C) |
Significance | Other |
Disease | not provided Central core disease Malignant hyperthermia |
Variation | info |
Gene | RYR1 |
CLNDBN | not provided Central core disease Malignant hyperthermia, susceptibility to, 1 |
Reversed | 0 |
HGVS | NC_000019.9:g.38991538C>G; NC_000019.9:g.38991538C>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000119717.1, RCV000056228.2, RCV000119718.1, RCV000178618.1, |
[PMID 12565913] Principal mutation hotspot for central core disease and related myopathies in the C-terminal transmembrane region of the RYR1 gene.
[PMID 16621918] Central core disease is due to RYR1 mutations in more than 90% of patients.
[PMID 16732084] Malignant hyperthermia in Japan: mutation screening of the entire ryanodine receptor type 1 gene coding region by direct sequencing.
[PMID 16917943] Mutations in RYR1 in malignant hyperthermia and central core disease.