rs119451946
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | Carrier of an early-onset Parkinson's mutation |
(T;T) | 8.9 | Parkinson's disease, type 6, early-onset; likely |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 20648577 |
Gene | PINK1, PINK1-AS |
is a | snp |
is | mentioned by |
dbSNP | rs119451946 |
dbSNP (classic) | rs119451946 |
ClinGen | rs119451946 |
ebi | rs119451946 |
HLI | rs119451946 |
Exac | rs119451946 |
Gnomad | rs119451946 |
Varsome | rs119451946 |
LitVar | rs119451946 |
Map | rs119451946 |
PheGenI | rs119451946 |
Biobank | rs119451946 |
1000 genomes | rs119451946 |
hgdp | rs119451946 |
ensembl | rs119451946 |
geneview | rs119451946 |
scholar | rs119451946 |
rs119451946 | |
pharmgkb | rs119451946 |
gwascentral | rs119451946 |
openSNP | rs119451946 |
23andMe | rs119451946 |
SNPshot | rs119451946 |
SNPdbe | rs119451946 |
MSV3d | rs119451946 |
GWAS Ctlg | rs119451946 |
Max Magnitude | 8.9 |
c.1196C>T (p.Pro399Leu)
23andMe calls this i5003745
ClinVar | |
---|---|
Risk | Rs119451946(T;T) |
Alt | Rs119451946(T;T) |
Reference | Rs119451946(C;C) |
Significance | Pathogenic |
Disease | Parkinson disease Parkinson Disease |
Variation | info |
Gene | PINK1-AS PINK1 |
CLNDBN | Parkinson disease, autosomal recessive early-onset, digenic, PINK1/DJ1 Parkinson Disease, Recessive |
Reversed | 0 |
HGVS | NC_000001.10:g.20975070C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000002518.2, RCV000372794.1, |