rs11966200

plus

Geno	Mag	Summary
(C;C)	0	common on affy axiom data
(C;T)		1.88x risk of vitiligo
(T;T)		1.88x risk of vitiligo

Reference

GRCh38 38.1/141

Chromosome

6

Position

31869289

Gene

SLC44A4

is a	snp
is	mentioned by
dbSNP	rs11966200
dbSNP (classic)	rs11966200
ClinGen	rs11966200
ebi	rs11966200
HLI	rs11966200
Exac	rs11966200
Gnomad	rs11966200
Varsome	rs11966200
LitVar	rs11966200
Map	rs11966200
PheGenI	rs11966200
Biobank	rs11966200
1000 genomes	rs11966200
hgdp	rs11966200
ensembl	rs11966200
geneview	rs11966200
scholar	rs11966200
google	rs11966200
pharmgkb	rs11966200
gwascentral	rs11966200
openSNP	rs11966200
23andMe	rs11966200
SNPshot	rs11966200
SNPdbe	rs11966200
MSV3d	rs11966200
GWAS Ctlg	rs11966200

GMAF

0.04591

Max Magnitude

0

?

(C;C) (C;T) (T;T)

28

GWAS snp
PMID	[PMID 20526339]
Trait	Vitiligo
Title	Genome-wide association study for vitiligo identifies susceptibility loci at 6q27 and the MHC
Risk Allele	A
P-val	1E-48
Odds Ratio	1.90 [1.74-2.07]

OMIM	193200
Desc
Variant
Related	also

[PMID 23516070] The association between a single nucleotide polymorphism rs11966200 in MHC region and clinical features of generalized vitiligo in Chinese Han population