rs121907987
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 3 | Carrier of a phosphoglycerate dehydrogenase deficiency mutation |
(G;G) | 0 | common in clinvar |
Make rs121907987(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 119743906 |
Gene | PHGDH |
is a | snp |
is | mentioned by |
dbSNP | rs121907987 |
dbSNP (classic) | rs121907987 |
ClinGen | rs121907987 |
ebi | rs121907987 |
HLI | rs121907987 |
Exac | rs121907987 |
Gnomad | rs121907987 |
Varsome | rs121907987 |
LitVar | rs121907987 |
Map | rs121907987 |
PheGenI | rs121907987 |
Biobank | rs121907987 |
1000 genomes | rs121907987 |
hgdp | rs121907987 |
ensembl | rs121907987 |
geneview | rs121907987 |
scholar | rs121907987 |
rs121907987 | |
pharmgkb | rs121907987 |
gwascentral | rs121907987 |
openSNP | rs121907987 |
23andMe | rs121907987 |
SNPshot | rs121907987 |
SNPdbe | rs121907987 |
MSV3d | rs121907987 |
GWAS Ctlg | rs121907987 |
GMAF | 0.0004591 |
Max Magnitude | 3 |
aka c.1468G>A (p.Val490Met or V490M)
ClinVar | |
---|---|
Risk | rs121907987(A;A) |
Alt | rs121907987(A;A) |
Reference | Rs121907987(G;G) |
Significance | Pathogenic |
Disease | Phosphoglycerate dehydrogenase deficiency |
Variation | info |
Gene | PHGDH |
CLNDBN | Phosphoglycerate dehydrogenase deficiency |
Reversed | 0 |
HGVS | NC_000001.10:g.120286529G>A |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000004071.3, |