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rs121908039

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;G) 5 Familial Hypercholesterolemia
(C;G) 5 Familial Hypercholesterolemia
(G;G) 0 common in complete genomics


Make rs121908039(A;A)
ReferenceGRCh38 38.1/141
Chromosome19
Position11105457
GeneLDLR
is asnp
is mentioned by
dbSNPrs121908039
dbSNP (classic)rs121908039
ClinGenrs121908039
ebirs121908039
HLIrs121908039
Exacrs121908039
Gnomadrs121908039
Varsomers121908039
LitVarrs121908039
Maprs121908039
PheGenIrs121908039
Biobankrs121908039
1000 genomesrs121908039
hgdprs121908039
ensemblrs121908039
geneviewrs121908039
scholarrs121908039
googlers121908039
pharmgkbrs121908039
gwascentralrs121908039
openSNPrs121908039
23andMers121908039
SNPshotrs121908039
SNPdbers121908039
MSV3drs121908039
GWAS Ctlgrs121908039
Max Magnitude5

aka c.551G>A, p.Cys184Tyr or C184Y; also known as FH Glasco and FH Rome-2; note also presence of c.551G>C (p.Cys184Ser or C184S), which is also likely to be pathogenic according to ClinVar

FH Glasco is one of the most common South Asian and non-Finnish European FH mutations in ExAC/Broad data.

Reported in ClinVar as pathogenic for familial hypercholesterolemia and therefore increased risk for coronary artery disease

OMIM606945
Desc
Variant0058
Relatedalso
ClinVar
Risk rs121908039(A;A)
Alt rs121908039(A;A)
Reference Rs121908039(G;G)
Significance Other
Disease Familial hypercholesterolemia
Variation info
Gene LDLR
CLNDBN Familial hypercholesterolemia
Reversed 0
HGVS NC_000019.9:g.11216133G>A
CLNSRC LDLR @ LOVD OMIM Allelic Variant UniProtKB (protein)
CLNACC RCV000003937.8,