rs121913315
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 5.8 | STK11 gene mutation associated with Peutz-Jeghers syndrome |
(G;G) | 0 | common in clinvar |
(G;T) | 5.8 | Cutaneous malignant melanoma designation in Clinvar; cancer risk? |
Make rs121913315(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 19 |
Position | 1220488 |
Gene | STK11 |
is a | snp |
is | mentioned by |
dbSNP | rs121913315 |
dbSNP (classic) | rs121913315 |
ClinGen | rs121913315 |
ebi | rs121913315 |
HLI | rs121913315 |
Exac | rs121913315 |
Gnomad | rs121913315 |
Varsome | rs121913315 |
LitVar | rs121913315 |
Map | rs121913315 |
PheGenI | rs121913315 |
Biobank | rs121913315 |
1000 genomes | rs121913315 |
hgdp | rs121913315 |
ensembl | rs121913315 |
geneview | rs121913315 |
scholar | rs121913315 |
rs121913315 | |
pharmgkb | rs121913315 |
gwascentral | rs121913315 |
openSNP | rs121913315 |
23andMe | rs121913315 |
SNPshot | rs121913315 |
SNPdbe | rs121913315 |
MSV3d | rs121913315 |
GWAS Ctlg | rs121913315 |
Max Magnitude | 5.8 |
c.580G>T (p.Asp194Tyr) and also c.580G>A (p.Asp194Asn)
23andMe name for c.580G>T: i5006537
ClinVar | |
---|---|
Risk | rs121913315(A;A) rs121913315(T;T) |
Alt | rs121913315(A;A) rs121913315(T;T) |
Reference | Rs121913315(G;G) |
Significance | Other |
Disease | Peutz-Jeghers syndrome Adenocarcinoma of lung Neoplasm Hereditary cancer-predisposing syndrome Cutaneous malignant melanoma 1 Malignant melanoma |
Variation | info |
Gene | STK11 |
CLNDBN | Peutz-Jeghers syndrome Adenocarcinoma of lung Neoplasm Hereditary cancer-predisposing syndrome Cutaneous malignant melanoma 1 Malignant melanoma |
Reversed | 0 |
HGVS | NC_000019.9:g.1220487G>A; NC_000019.9:g.1220487G>T |
CLNSRC | UniProtKB (protein) OMIM Allelic Variant |
CLNACC | RCV000168375.2, RCV000427095.1, RCV000445048.1, RCV000492479.1, RCV000007876.8, RCV000440206.1, |