rs121918540
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | Carrier of a hemophagocytic lymphohistiocytosis (HLH) mutation |
Make rs121918540(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 19 |
Position | 7646322 |
Gene | STXBP2 |
is a | snp |
is | mentioned by |
dbSNP | rs121918540 |
dbSNP (classic) | rs121918540 |
ClinGen | rs121918540 |
ebi | rs121918540 |
HLI | rs121918540 |
Exac | rs121918540 |
Gnomad | rs121918540 |
Varsome | rs121918540 |
LitVar | rs121918540 |
Map | rs121918540 |
PheGenI | rs121918540 |
Biobank | rs121918540 |
1000 genomes | rs121918540 |
hgdp | rs121918540 |
ensembl | rs121918540 |
geneview | rs121918540 |
scholar | rs121918540 |
rs121918540 | |
pharmgkb | rs121918540 |
gwascentral | rs121918540 |
openSNP | rs121918540 |
23andMe | rs121918540 |
SNPshot | rs121918540 |
SNPdbe | rs121918540 |
MSV3d | rs121918540 |
GWAS Ctlg | rs121918540 |
Max Magnitude | 3 |
aka c.1430C>T (p.Pro477Leu)
considered pathogenic for familial hemophagocytic lymphohistiocytosis (HLH) in ClinVar
ClinVar | |
---|---|
Risk | rs121918540(T;T) |
Alt | rs121918540(T;T) |
Reference | Rs121918540(C;C) |
Significance | Pathogenic |
Disease | Hemophagocytic lymphohistiocytosis |
Variation | info |
Gene | STXBP2 |
CLNDBN | Hemophagocytic lymphohistiocytosis, familial, 5 |
Reversed | 0 |
HGVS | NC_000019.9:g.7711208C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000008308.2, |