rs121964855
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;T) | 6 | Familial hypertrophic cardiomyopathy (possible) |
(T;T) | 0 | common in clinvar |
Make rs121964855(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 201365638 |
Gene | TNNT2 |
is a | snp |
is | mentioned by |
dbSNP | rs121964855 |
dbSNP (classic) | rs121964855 |
ClinGen | rs121964855 |
ebi | rs121964855 |
HLI | rs121964855 |
Exac | rs121964855 |
Gnomad | rs121964855 |
Varsome | rs121964855 |
LitVar | rs121964855 |
Map | rs121964855 |
PheGenI | rs121964855 |
Biobank | rs121964855 |
1000 genomes | rs121964855 |
hgdp | rs121964855 |
ensembl | rs121964855 |
geneview | rs121964855 |
scholar | rs121964855 |
rs121964855 | |
pharmgkb | rs121964855 |
gwascentral | rs121964855 |
openSNP | rs121964855 |
23andMe | rs121964855 |
SNPshot | rs121964855 |
SNPdbe | rs121964855 |
MSV3d | rs121964855 |
GWAS Ctlg | rs121964855 |
Max Magnitude | 6 |
The rare minor allele of this variant is reported to be pathogenic/likely pathogenic for familial hypertrophic cardiomyopathy (HCM), according to [PMID 25611685].
ClinVar | |
---|---|
Risk | rs121964855(A;A) |
Alt | rs121964855(A;A) |
Reference | Rs121964855(T;T) |
Significance | Other |
Disease | Familial hypertrophic cardiomyopathy 2 Left ventricular noncompaction 6 Familial restrictive cardiomyopathy 3 not provided Primary familial hypertrophic cardiomyopathy Cardiovascular phenotype |
Variation | info |
Gene | TNNT2 |
CLNDBN | Familial hypertrophic cardiomyopathy 2 Left ventricular noncompaction 6 Familial restrictive cardiomyopathy 3 not provided Primary familial hypertrophic cardiomyopathy Cardiovascular phenotype |
Reversed | 1 |
HGVS | NC_000001.10:g.201334766A>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000013217.29, RCV000013218.16, RCV000013219.23, RCV000159272.2, RCV000211864.2, RCV000243910.1, |