rs137852912
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;G) | 5 | Familial Hypercholesterolemia |
(G;G) | 0 | common in clinvar |
(G;T) | 4 | Dominant mutation associated with Familial Hypercholesterolemia |
Make rs137852912(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 55057454 |
Gene | PCSK9 |
is a | snp |
is | mentioned by |
dbSNP | rs137852912 |
dbSNP (classic) | rs137852912 |
ClinGen | rs137852912 |
ebi | rs137852912 |
HLI | rs137852912 |
Exac | rs137852912 |
Gnomad | rs137852912 |
Varsome | rs137852912 |
LitVar | rs137852912 |
Map | rs137852912 |
PheGenI | rs137852912 |
Biobank | rs137852912 |
1000 genomes | rs137852912 |
hgdp | rs137852912 |
ensembl | rs137852912 |
geneview | rs137852912 |
scholar | rs137852912 |
rs137852912 | |
pharmgkb | rs137852912 |
gwascentral | rs137852912 |
openSNP | rs137852912 |
23andMe | rs137852912 |
SNPshot | rs137852912 |
SNPdbe | rs137852912 |
MSV3d | rs137852912 |
GWAS Ctlg | rs137852912 |
Max Magnitude | 5 |
aka c.1120G>T, p.Asp374Tyr or D374Y
reported in ClinVar as pathogenic for familial hypercholesterolemia and therefore increased risk for coronary artery disease
This SNP was not present on earlier versions of the Ancestry v2 DNA chip (originally released ~May 2016), but is now present in some "v2" data files from Ancestry starting sometime in 2018.
ClinVar | |
---|---|
Risk | rs137852912(A;A) rs137852912(C;C) rs137852912(T;T) |
Alt | rs137852912(A;A) rs137852912(C;C) rs137852912(T;T) |
Reference | Rs137852912(G;G) |
Significance | Pathogenic |
Disease | Familial hypercholesterolemia Hypercholesterolemia |
Variation | info |
Gene | PCSK9 |
CLNDBN | Familial hypercholesterolemia Hypercholesterolemia, autosomal dominant, 3 |
Reversed | 0 |
HGVS | NC_000001.10:g.55523127G>C; NC_000001.10:g.55523127G>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000256334.1, RCV000003009.3, |