rs137853097
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;T) | 3 | Carrier of a DBP deficiency mutation |
(T;T) | 7 | DBP deficiency (predicted) |
Reference | GRCh38 38.1/141 |
Chromosome | 5 |
Position | 119509176 |
Gene | HSD17B4 |
is a | snp |
is | mentioned by |
dbSNP | rs137853097 |
dbSNP (classic) | rs137853097 |
ClinGen | rs137853097 |
ebi | rs137853097 |
HLI | rs137853097 |
Exac | rs137853097 |
Gnomad | rs137853097 |
Varsome | rs137853097 |
LitVar | rs137853097 |
Map | rs137853097 |
PheGenI | rs137853097 |
Biobank | rs137853097 |
1000 genomes | rs137853097 |
hgdp | rs137853097 |
ensembl | rs137853097 |
geneview | rs137853097 |
scholar | rs137853097 |
rs137853097 | |
pharmgkb | rs137853097 |
gwascentral | rs137853097 |
openSNP | rs137853097 |
23andMe | rs137853097 |
SNPshot | rs137853097 |
SNPdbe | rs137853097 |
MSV3d | rs137853097 |
GWAS Ctlg | rs137853097 |
Max Magnitude | 7 |
aka c.1369A>T (p.Asn457Tyr or N457Y), and also c.1369A>G (p.Asn457Asp or N457D); the former is considered in ClinVar to be pathogenic, the latter likely to be pathogenic
23andMe name for c.1369A>T: i5007146
ClinVar | |
---|---|
Risk | rs137853097(G;G) Rs137853097(T;T) |
Alt | rs137853097(G;G) Rs137853097(T;T) |
Reference | Rs137853097(A;A) |
Significance | Other |
Disease | Bifunctional peroxisomal enzyme deficiency not provided Gonadal dysgenesis with auditory dysfunction |
Variation | info |
Gene | HSD17B4 |
CLNDBN | Bifunctional peroxisomal enzyme deficiency not provided Gonadal dysgenesis with auditory dysfunction, autosomal recessive inheritance |
Reversed | 0 |
HGVS | NC_000005.9:g.118844871A>G; NC_000005.9:g.118844871A>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000410433.1, RCV000008095.2, RCV000385297.1, RCV000477799.1, |