rs137853336
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 2 | associated with MODY1; maturity onset of diabetes in the young (type 1) |
Make rs137853336(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 20 |
Position | 44413714 |
Gene | HNF4A |
is a | snp |
is | mentioned by |
dbSNP | rs137853336 |
dbSNP (classic) | rs137853336 |
ClinGen | rs137853336 |
ebi | rs137853336 |
HLI | rs137853336 |
Exac | rs137853336 |
Gnomad | rs137853336 |
Varsome | rs137853336 |
LitVar | rs137853336 |
Map | rs137853336 |
PheGenI | rs137853336 |
Biobank | rs137853336 |
1000 genomes | rs137853336 |
hgdp | rs137853336 |
ensembl | rs137853336 |
geneview | rs137853336 |
scholar | rs137853336 |
rs137853336 | |
pharmgkb | rs137853336 |
gwascentral | rs137853336 |
openSNP | rs137853336 |
23andMe | rs137853336 |
SNPshot | rs137853336 |
SNPdbe | rs137853336 |
MSV3d | rs137853336 |
GWAS Ctlg | rs137853336 |
Max Magnitude | 2 |
aka c.406C>T (p.Arg136Trp or R136W); known in older literature as c.340C>T (p.Arg114Trp or R114W)
A 2019 study of >300,000 UK BioBank participants of European ancestry concluded that while this variant is associated with a higher risk of diabetes (OR 2.9, CI: 1.7-5.0, p=3x1-e-4), the penetrance was estimated to be <10%. Therefore, if this variant is seen in a diabetic, it might be the primary cause, but incidental discovery of the variant in a healthy (non-diabetic) individual is of little predictive value.[PMID 30665703]
See also OMIM 600281.0003
ClinVar | |
---|---|
Risk | rs137853336(G;G) rs137853336(T;T) |
Alt | rs137853336(G;G) rs137853336(T;T) |
Reference | Rs137853336(C;C) |
Significance | Pathogenic |
Disease | Maturity-onset diabetes of the young |
Variation | info |
Gene | HNF4A |
CLNDBN | Maturity-onset diabetes of the young, type 1 |
Reversed | 0 |
HGVS | NC_000020.10:g.43042354C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000009792.6, |