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rs137853336

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in clinvar
(C;T) 2 associated with MODY1; maturity onset of diabetes in the young (type 1)
Make rs137853336(T;T)
ReferenceGRCh38 38.1/141
Chromosome20
Position44413714
GeneHNF4A
is asnp
is mentioned by
dbSNPrs137853336
dbSNP (classic)rs137853336
ClinGenrs137853336
ebirs137853336
HLIrs137853336
Exacrs137853336
Gnomadrs137853336
Varsomers137853336
LitVarrs137853336
Maprs137853336
PheGenIrs137853336
Biobankrs137853336
1000 genomesrs137853336
hgdprs137853336
ensemblrs137853336
geneviewrs137853336
scholarrs137853336
googlers137853336
pharmgkbrs137853336
gwascentralrs137853336
openSNPrs137853336
23andMers137853336
SNPshotrs137853336
SNPdbers137853336
MSV3drs137853336
GWAS Ctlgrs137853336
Max Magnitude2

aka c.406C>T (p.Arg136Trp or R136W); known in older literature as c.340C>T (p.Arg114Trp or R114W)

A 2019 study of >300,000 UK BioBank participants of European ancestry concluded that while this variant is associated with a higher risk of diabetes (OR 2.9, CI: 1.7-5.0, p=3x1-e-4), the penetrance was estimated to be <10%. Therefore, if this variant is seen in a diabetic, it might be the primary cause, but incidental discovery of the variant in a healthy (non-diabetic) individual is of little predictive value.[PMID 30665703OA-icon.png]

See also OMIM 600281.0003

OMIM600281
Desc
Variant0003
Relatedalso
ClinVar
Risk rs137853336(G;G) rs137853336(T;T)
Alt rs137853336(G;G) rs137853336(T;T)
Reference Rs137853336(C;C)
Significance Pathogenic
Disease Maturity-onset diabetes of the young
Variation info
Gene HNF4A
CLNDBN Maturity-onset diabetes of the young, type 1
Reversed 0
HGVS NC_000020.10:g.43042354C>T
CLNSRC OMIM Allelic Variant UniProtKB (protein)
CLNACC RCV000009792.6,