rs137886900
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 5 | TK-2 related mitochondrial depletion syndrome (myopathic) |
(A;G) | 3 | Carrier of a mitochondrial depletion syndrome mutation |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 66517207 |
Gene | TK2 |
is a | snp |
is | mentioned by |
dbSNP | rs137886900 |
dbSNP (classic) | rs137886900 |
ClinGen | rs137886900 |
ebi | rs137886900 |
HLI | rs137886900 |
Exac | rs137886900 |
Gnomad | rs137886900 |
Varsome | rs137886900 |
LitVar | rs137886900 |
Map | rs137886900 |
PheGenI | rs137886900 |
Biobank | rs137886900 |
1000 genomes | rs137886900 |
hgdp | rs137886900 |
ensembl | rs137886900 |
geneview | rs137886900 |
scholar | rs137886900 |
rs137886900 | |
pharmgkb | rs137886900 |
gwascentral | rs137886900 |
openSNP | rs137886900 |
23andMe | rs137886900 |
SNPshot | rs137886900 |
SNPdbe | rs137886900 |
MSV3d | rs137886900 |
GWAS Ctlg | rs137886900 |
Max Magnitude | 5 |
Reported as pathogenic in ClinVar for TK2 related mitochondrial depletion syndrome (myopathic form), a recessively inherited condition
ClinVar | |
---|---|
Risk | Rs137886900(A;A) rs137886900(C;C) rs137886900(T;T) |
Alt | Rs137886900(A;A) rs137886900(C;C) rs137886900(T;T) |
Reference | Rs137886900(G;G) |
Significance | Pathogenic |
Disease | Mitochondrial DNA depletion syndrome 2 Progressive external ophthalmoplegia with mitochondrial DNA deletions |
Variation | info |
Gene | TK2 |
CLNDBN | Mitochondrial DNA depletion syndrome 2 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3 |
Reversed | 0 |
HGVS | NC_000016.9:g.66551110G>A; NC_000016.9:g.66551110G>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000032251.4, RCV000239457.1, RCV000032250.1, |