rs138439950
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 5 | TK-2 related mitochondrial depletion syndrome (myopathic) |
(C;T) | 3 | Carrier of a mitochondrial depletion syndrome mutation |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 66541937 |
Gene | TK2 |
is a | snp |
is | mentioned by |
dbSNP | rs138439950 |
dbSNP (classic) | rs138439950 |
ClinGen | rs138439950 |
ebi | rs138439950 |
HLI | rs138439950 |
Exac | rs138439950 |
Gnomad | rs138439950 |
Varsome | rs138439950 |
LitVar | rs138439950 |
Map | rs138439950 |
PheGenI | rs138439950 |
Biobank | rs138439950 |
1000 genomes | rs138439950 |
hgdp | rs138439950 |
ensembl | rs138439950 |
geneview | rs138439950 |
scholar | rs138439950 |
rs138439950 | |
pharmgkb | rs138439950 |
gwascentral | rs138439950 |
openSNP | rs138439950 |
23andMe | rs138439950 |
SNPshot | rs138439950 |
SNPdbe | rs138439950 |
MSV3d | rs138439950 |
GWAS Ctlg | rs138439950 |
Max Magnitude | 5 |
Reported as pathogenic in ClinVar for TK2 related mitochondrial depletion syndrome (myopathic form), a recessively inherited condition
ClinVar | |
---|---|
Risk | Rs138439950(C;C) |
Alt | Rs138439950(C;C) |
Reference | Rs138439950(T;T) |
Significance | Pathogenic |
Disease | Mitochondrial DNA depletion syndrome 2 |
Variation | info |
Gene | TK2 |
CLNDBN | Mitochondrial DNA depletion syndrome 2 |
Reversed | 0 |
HGVS | NC_000016.9:g.66575840T>C |
CLNSRC | ClinVar GeneReviews |
CLNACC | RCV000032237.1, |