rs140987490
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;G) | 3 | carrier of a Friedreich's ataxia allele |
(G;G) | 6 | Friedreich's ataxia |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69064936 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs140987490 |
dbSNP (classic) | rs140987490 |
ClinGen | rs140987490 |
ebi | rs140987490 |
HLI | rs140987490 |
Exac | rs140987490 |
Gnomad | rs140987490 |
Varsome | rs140987490 |
LitVar | rs140987490 |
Map | rs140987490 |
PheGenI | rs140987490 |
Biobank | rs140987490 |
1000 genomes | rs140987490 |
hgdp | rs140987490 |
ensembl | rs140987490 |
geneview | rs140987490 |
scholar | rs140987490 |
rs140987490 | |
pharmgkb | rs140987490 |
gwascentral | rs140987490 |
openSNP | rs140987490 |
23andMe | rs140987490 |
SNPshot | rs140987490 |
SNPdbe | rs140987490 |
MSV3d | rs140987490 |
GWAS Ctlg | rs140987490 |
Max Magnitude | 6 |
rs140987490, also known as c.384-2_A>G or , is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | Rs140987490(G;G) |
Alt | Rs140987490(G;G) |
Reference | Rs140987490(A;A) |
Significance | Pathogenic |
Disease | Friedreich's ataxia |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich's ataxia |
Reversed | 0 |
HGVS | NC_000009.11:g.71679852A>G |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000004187.3, |
[PMID 8596916] Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion.