rs143332484
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;T) | 2 | Moderate increase (1.67x) in risk for Alzheimer's disease |
(T;T) | 2 | Moderate increase (1.67x) in risk for Alzheimer's disease |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 6 |
Position | 41161469 |
Gene | LOC105375056, TREM2 |
is a | snp |
is | mentioned by |
dbSNP | rs143332484 |
dbSNP (classic) | rs143332484 |
ClinGen | rs143332484 |
ebi | rs143332484 |
HLI | rs143332484 |
Exac | rs143332484 |
Gnomad | rs143332484 |
Varsome | rs143332484 |
LitVar | rs143332484 |
Map | rs143332484 |
PheGenI | rs143332484 |
Biobank | rs143332484 |
1000 genomes | rs143332484 |
hgdp | rs143332484 |
ensembl | rs143332484 |
geneview | rs143332484 |
scholar | rs143332484 |
rs143332484 | |
pharmgkb | rs143332484 |
gwascentral | rs143332484 |
openSNP | rs143332484 |
23andMe | rs143332484 |
SNPshot | rs143332484 |
SNPdbe | rs143332484 |
MSV3d | rs143332484 |
GWAS Ctlg | rs143332484 |
Max Magnitude | 2 |
rs143332484 (p.Arg62His) is a risk variant for Alzheimer's disease found in the TREM2 gene (P = 1.55 × 10-14, OR = 1.67). This gene is highly expressed in microglia which are known to interact with the immune system in AD.[PMID 28714976]