rs143797113
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 6 | Deafness; early-onset (prelingual) |
(A;G) | 3 | Carrier of a deafness mutation |
(G;G) | 0 | common/normal |
Reference | GRCh38.p7 38.3/149 |
Chromosome | 21 |
Position | 36461208 |
Gene | CLDN14, LOC105369301 |
is a | snp |
is | mentioned by |
dbSNP | rs143797113 |
dbSNP (classic) | rs143797113 |
ClinGen | rs143797113 |
ebi | rs143797113 |
HLI | rs143797113 |
Exac | rs143797113 |
Gnomad | rs143797113 |
Varsome | rs143797113 |
LitVar | rs143797113 |
Map | rs143797113 |
PheGenI | rs143797113 |
Biobank | rs143797113 |
1000 genomes | rs143797113 |
hgdp | rs143797113 |
ensembl | rs143797113 |
geneview | rs143797113 |
scholar | rs143797113 |
rs143797113 | |
pharmgkb | rs143797113 |
gwascentral | rs143797113 |
openSNP | rs143797113 |
23andMe | rs143797113 |
SNPshot | rs143797113 |
SNPdbe | rs143797113 |
MSV3d | rs143797113 |
GWAS Ctlg | rs143797113 |
Max Magnitude | 6 |
rs143797113, also known as c.488C>T and p.Ala163Val, represents an uncommon variant in the CLDN14 gene on chromosome 21.
Although initially reported in ClinVar as a variant of unknown significance, the minor rs143797113(A) is now published as pathogenic for an early (childhood) onset form of deafness when inherited recessively, i.e. in homozygous minor or compound heterozgyote form.[PMID 27838790]
ClinVar | |
---|---|
Risk | Rs143797113(A;A) |
Alt | Rs143797113(A;A) |
Reference | Rs143797113(G;G) |
Significance | Unknown |
Disease | not specified |
Variation | info |
Gene | CLDN14 |
CLNDBN | not specified |
Reversed | 0 |
HGVS | NC_000021.8:g.37833506G>A |
CLNSRC | |
CLNACC | RCV000222605.1, |