rs1564282
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common on affy axiom data |
| Make rs1564282(C;T) |
| Make rs1564282(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 858525 |
| Gene | GAK |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1564282 |
| dbSNP (classic) | rs1564282 |
| ClinGen | rs1564282 |
| ebi | rs1564282 |
| HLI | rs1564282 |
| Exac | rs1564282 |
| Gnomad | rs1564282 |
| Varsome | rs1564282 |
| LitVar | rs1564282 |
| Map | rs1564282 |
| PheGenI | rs1564282 |
| Biobank | rs1564282 |
| 1000 genomes | rs1564282 |
| hgdp | rs1564282 |
| ensembl | rs1564282 |
| geneview | rs1564282 |
| scholar | rs1564282 |
| rs1564282 | |
| pharmgkb | rs1564282 |
| gwascentral | rs1564282 |
| openSNP | rs1564282 |
| 23andMe | rs1564282 |
| SNPshot | rs1564282 |
| SNPdbe | rs1564282 |
| MSV3d | rs1564282 |
| GWAS Ctlg | rs1564282 |
| GMAF | 0.08356 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 18985386 ]
|
| Trait | Parkinson disease (familial) |
| Title | Genomewide association study for susceptibility genes contributing to familial Parkinson disease |
| Risk Allele | T |
| P-val | 7E-7 |
| Odds Ratio | 1.70 [NR] |
[PMID 21058943] Replication of GWAS associations for GAK and MAPT in Parkinson's disease
[PMID 22198721] GWAS-linked GAK locus in Parkinson's disease in Han Chinese and meta-analysis
[PMID 21258085] Cyclin-G-associated kinase modifies alpha-synuclein expression levels and toxicity in Parkinson's disease: results from the GenePD Study.
[PMID 21281506] A unified framework for multi-locus association analysis of both common and rare variants.
[PMID 23826309] Genetic Variations of GAK in Two Chinese Parkinson's Disease Populations: A Case-Control Study
[PMID 23618683] GAK rs1564282 and DGKQ rs11248060 increase the risk for Parkinson's disease in a Chinese population.
