rs1800944
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in complete genomics |
Make rs1800944(C;T) |
Make rs1800944(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 46373906 |
Gene | CCR5, LOC102724297 |
is a | snp |
is | mentioned by |
dbSNP | rs1800944 |
dbSNP (classic) | rs1800944 |
ClinGen | rs1800944 |
ebi | rs1800944 |
HLI | rs1800944 |
Exac | rs1800944 |
Gnomad | rs1800944 |
Varsome | rs1800944 |
LitVar | rs1800944 |
Map | rs1800944 |
PheGenI | rs1800944 |
Biobank | rs1800944 |
1000 genomes | rs1800944 |
hgdp | rs1800944 |
ensembl | rs1800944 |
geneview | rs1800944 |
scholar | rs1800944 |
rs1800944 | |
pharmgkb | rs1800944 |
gwascentral | rs1800944 |
openSNP | rs1800944 |
23andMe | rs1800944 |
SNPshot | rs1800944 |
SNPdbe | rs1800944 |
MSV3d | rs1800944 |
GWAS Ctlg | rs1800944 |
GMAF | 0.01148 |
Max Magnitude | 0 |
ClinVar | |
---|---|
Risk | rs1800944(G;G) rs1800944(T;T) |
Alt | rs1800944(G;G) rs1800944(T;T) |
Reference | Rs1800944(C;C) |
Significance | Non-pathogenic |
Disease | CCR5 POLYMORPHISM |
Variation | info |
Gene | LOC102724297 CCR5 |
CLNDBN | CCR5 POLYMORPHISM, AFRICAN-AMERICAN |
Reversed | 0 |
HGVS | NC_000003.11:g.46415397C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000008669.2, |
[PMID 20206716] Genetic variation within the gene encoding the HIV-1 CCR5 coreceptor in two South African populations.