rs180177143
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 7 | Fanconi anemia, complementation group N |
(-;TTGT) | 3 | increased risk of breast cancer |
(TTGT;TTGT) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 23637886 |
Gene | PALB2 |
is a | snp |
is | mentioned by |
dbSNP | rs180177143 |
dbSNP (classic) | rs180177143 |
ClinGen | rs180177143 |
ebi | rs180177143 |
HLI | rs180177143 |
Exac | rs180177143 |
Gnomad | rs180177143 |
Varsome | rs180177143 |
LitVar | rs180177143 |
Map | rs180177143 |
PheGenI | rs180177143 |
Biobank | rs180177143 |
1000 genomes | rs180177143 |
hgdp | rs180177143 |
ensembl | rs180177143 |
geneview | rs180177143 |
scholar | rs180177143 |
rs180177143 | |
pharmgkb | rs180177143 |
gwascentral | rs180177143 |
openSNP | rs180177143 |
23andMe | rs180177143 |
SNPshot | rs180177143 |
SNPdbe | rs180177143 |
MSV3d | rs180177143 |
GWAS Ctlg | rs180177143 |
Max Magnitude | 7 |
ClinVar | |
---|---|
Risk | Rs180177143(-;-) |
Alt | Rs180177143(-;-) |
Reference | Rs180177143(TTGT;TTGT) |
Significance | Other |
Disease | Familial cancer of breast Pancreatic cancer 3 Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | PALB2 |
CLNDBN | Familial cancer of breast Pancreatic cancer 3 Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000016.9:g.23649207_23649210delACAA |
CLNSRC | OMIM Allelic Variant PALB2 database |
CLNACC | RCV000114496.4, RCV000114497.3, RCV000116073.7, RCV000212770.3, |
[PMID 21285249] Contribution of inherited mutations in the BRCA2-interacting protein PALB2 to familial breast cancer.