rs188286943
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 6.5 | Parkinson's disease mutation, adult-onset |
Make rs188286943(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 46662452 |
Gene | VPS35 |
is a | snp |
is | mentioned by |
dbSNP | rs188286943 |
dbSNP (classic) | rs188286943 |
ClinGen | rs188286943 |
ebi | rs188286943 |
HLI | rs188286943 |
Exac | rs188286943 |
Gnomad | rs188286943 |
Varsome | rs188286943 |
LitVar | rs188286943 |
Map | rs188286943 |
PheGenI | rs188286943 |
Biobank | rs188286943 |
1000 genomes | rs188286943 |
hgdp | rs188286943 |
ensembl | rs188286943 |
geneview | rs188286943 |
scholar | rs188286943 |
rs188286943 | |
pharmgkb | rs188286943 |
gwascentral | rs188286943 |
openSNP | rs188286943 |
23andMe | rs188286943 |
SNPshot | rs188286943 |
SNPdbe | rs188286943 |
MSV3d | rs188286943 |
GWAS Ctlg | rs188286943 |
Max Magnitude | 6.5 |
aka c.1858G>A, p.Asp620Asn, D620N
Lengthy discussion on OMIM at 601501.0001
Considered "definitely pathogenic" in the Movement Disorder Society Genetic mutation database (MDSGene) for autosomal dominant Parkinson disease.
ClinVar | |
---|---|
Risk | rs188286943(T;T) |
Alt | rs188286943(T;T) |
Reference | Rs188286943(C;C) |
Significance | Pathogenic |
Disease | Parkinson disease 17 |
Variation | info |
Gene | VPS35 |
CLNDBN | Parkinson disease 17 |
Reversed | 0 |
HGVS | NC_000016.9:g.46696364C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000023115.5, |