rs2160525
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in complete genomics |
Make rs2160525(A;A) |
Make rs2160525(A;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 12 |
Position | 12117356 |
Gene | LRP6 |
is a | snp |
is | mentioned by |
dbSNP | rs2160525 |
dbSNP (classic) | rs2160525 |
ClinGen | rs2160525 |
ebi | rs2160525 |
HLI | rs2160525 |
Exac | rs2160525 |
Gnomad | rs2160525 |
Varsome | rs2160525 |
LitVar | rs2160525 |
Map | rs2160525 |
PheGenI | rs2160525 |
Biobank | rs2160525 |
1000 genomes | rs2160525 |
hgdp | rs2160525 |
ensembl | rs2160525 |
geneview | rs2160525 |
scholar | rs2160525 |
rs2160525 | |
pharmgkb | rs2160525 |
gwascentral | rs2160525 |
openSNP | rs2160525 |
23andMe | rs2160525 |
SNPshot | rs2160525 |
SNPdbe | rs2160525 |
MSV3d | rs2160525 |
GWAS Ctlg | rs2160525 |
GMAF | 0.1373 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
Rs2160525 | |
---|---|
PubMed | [PMID 17517621] |
Affy Probeset | SNP_A-1861148 |
Affy Orientation | same |
On GW 5.0 | 1 |
Alleles A/B | A/G |
Ancestral | G |
Population | Caucasian |
Allele | G |
Case Freq. | 0.85 |
Control Freq. | 0.81 |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.30 |
Disease | Alzheimer's disease, late-onset (LOAD) |
rs2160525 is in linkage disequilibrium with a polymorphism that increases susceptibility to late-onset Alzheimer's disease (LOAD) 1.30 times for carriers of the G allele. [PMID 17517621]
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 12
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d