rs2609653
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | |
(C;C) | 3.6x risk | |
(C;T) | 1.5x risk | |
(T;T) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 8 |
Position | 34379474 |
is a | snp |
is | mentioned by |
dbSNP | rs2609653 |
dbSNP (classic) | rs2609653 |
ClinGen | rs2609653 |
ebi | rs2609653 |
HLI | rs2609653 |
Exac | rs2609653 |
Gnomad | rs2609653 |
Varsome | rs2609653 |
LitVar | rs2609653 |
Map | rs2609653 |
PheGenI | rs2609653 |
Biobank | rs2609653 |
1000 genomes | rs2609653 |
hgdp | rs2609653 |
ensembl | rs2609653 |
geneview | rs2609653 |
scholar | rs2609653 |
rs2609653 | |
pharmgkb | rs2609653 |
gwascentral | rs2609653 |
openSNP | rs2609653 |
23andMe | rs2609653 |
SNPshot | rs2609653 |
SNPdbe | rs2609653 |
MSV3d | rs2609653 |
GWAS Ctlg | rs2609653 |
GMAF | 0.05418 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
rs2609653 has been reported in a large study to be associated with bipolar disorder.
The risk allele (oriented to the dbSNP entry) is (C); the odds ratio associated with heterozygotes is 1.43 (CI 1.19-1.71), and for homozygotes, 3.62 (CI 1.26-10.44). [PMID 17554300]
GWAS snp | |
---|---|
PMID | [PMID 21254220] |
Trait | |
Title | Propensity score-based nonparametric test revealing genetic variants underlying bipolar disorder. |
Risk Allele | |
P-val | 0.000007 |
Odds Ratio | None None |
GWAS snp | |
---|---|
PMID | [PMID 23453885] |
Trait | Autism spectrum disorder, attention deficit-hyperactivity disorder, bipolar disorder, major depressive disorder, and schizophrenia (combined) |
Title | Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. |
Risk Allele | T |
P-val | 3E-6 |
Odds Ratio | 1.13 [1.07-1.19] |