rs28371733
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 1.5 | Homozygous for CYP2D6*52 variant. |
(A;G) | 1 | Carrier of one CYP2D6*52 variant. |
(C;C) | 3 | Homozygous for non-functioning CYP2D6*4H variant. |
(C;G) | 2 | Carrier of one CYP2D6*4H non-functioning variant. |
(G;G) | 0 | normal |
Reference | GRCh37 37.1/131 |
Chromosome | 22 |
Position | 42126914 |
Gene | CYP2D6, LOC102723722 |
is a | snp |
is | mentioned by |
dbSNP | rs28371733 |
dbSNP (classic) | rs28371733 |
ClinGen | rs28371733 |
ebi | rs28371733 |
HLI | rs28371733 |
Exac | rs28371733 |
Gnomad | rs28371733 |
Varsome | rs28371733 |
LitVar | rs28371733 |
Map | rs28371733 |
PheGenI | rs28371733 |
Biobank | rs28371733 |
1000 genomes | rs28371733 |
hgdp | rs28371733 |
ensembl | rs28371733 |
geneview | rs28371733 |
scholar | rs28371733 |
rs28371733 | |
pharmgkb | rs28371733 |
gwascentral | rs28371733 |
openSNP | rs28371733 |
23andMe | rs28371733 |
SNPshot | rs28371733 |
SNPdbe | rs28371733 |
MSV3d | rs28371733 |
GWAS Ctlg | rs28371733 |
Max Magnitude | 3 |
The wild type allele for this SNP is (G) in minus orientation. When it changes to (C) it is known as 3877G>C and is a marker for non-functioning variant CYP2D6*4H.
When it changes to (A) it is known as 3877G>A and is a marker for variant CYP2D6*52 which is possibly a decreased functioning variant, though more study is needed.[PMID 19364831]
Please note that this is in minus orientation and the 3877G>C version is subject to ambiguous flip.