rs28942068
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;G) | 2 | |
(G;G) | 3 |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 46192159 |
Gene | POMGNT1, TSPAN1 |
is a | snp |
is | mentioned by |
dbSNP | rs28942068 |
dbSNP (classic) | rs28942068 |
ClinGen | rs28942068 |
ebi | rs28942068 |
HLI | rs28942068 |
Exac | rs28942068 |
Gnomad | rs28942068 |
Varsome | rs28942068 |
LitVar | rs28942068 |
Map | rs28942068 |
PheGenI | rs28942068 |
Biobank | rs28942068 |
1000 genomes | rs28942068 |
hgdp | rs28942068 |
ensembl | rs28942068 |
geneview | rs28942068 |
scholar | rs28942068 |
rs28942068 | |
pharmgkb | rs28942068 |
gwascentral | rs28942068 |
openSNP | rs28942068 |
23andMe | rs28942068 |
SNPshot | rs28942068 |
SNPdbe | rs28942068 |
MSV3d | rs28942068 |
GWAS Ctlg | rs28942068 |
Max Magnitude | 3 |
ClinVar | |
---|---|
Risk | Rs28942068(G;G) |
Alt | Rs28942068(G;G) |
Reference | Rs28942068(C;C) |
Significance | Pathogenic |
Disease | Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies |
Variation | info |
Gene | POMGNT1 |
CLNDBN | Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3 |
Reversed | 1 |
HGVS | NC_000001.10:g.46657831G>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000004197.4, |