rs28942100
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | Carrier of a alkaptonuria mutation |
| Make rs28942100(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 120644405 |
| Gene | HGD |
| is a | snp |
| is | mentioned by |
| dbSNP | rs28942100 |
| dbSNP (classic) | rs28942100 |
| ClinGen | rs28942100 |
| ebi | rs28942100 |
| HLI | rs28942100 |
| Exac | rs28942100 |
| Gnomad | rs28942100 |
| Varsome | rs28942100 |
| LitVar | rs28942100 |
| Map | rs28942100 |
| PheGenI | rs28942100 |
| Biobank | rs28942100 |
| 1000 genomes | rs28942100 |
| hgdp | rs28942100 |
| ensembl | rs28942100 |
| geneview | rs28942100 |
| scholar | rs28942100 |
| rs28942100 | |
| pharmgkb | rs28942100 |
| gwascentral | rs28942100 |
| openSNP | rs28942100 |
| 23andMe | rs28942100 |
| SNPshot | rs28942100 |
| SNPdbe | rs28942100 |
| MSV3d | rs28942100 |
| GWAS Ctlg | rs28942100 |
| GMAF | 0.0004591 |
| Max Magnitude | 3 |
| ClinVar | |
|---|---|
| Risk | rs28942100(T;T) |
| Alt | rs28942100(T;T) |
| Reference | Rs28942100(C;C) |
| Significance | Pathogenic |
| Disease | Alkaptonuria |
| Variation | info |
| Gene | HGD |
| CLNDBN | Alkaptonuria |
| Reversed | 1 |
| HGVS | NC_000003.11:g.120363252G>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000003315.6, |
