rs3130544
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 |
Make rs3130544(A;A) |
Make rs3130544(A;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 31090563 |
is a | snp |
is | mentioned by |
dbSNP | rs3130544 |
dbSNP (classic) | rs3130544 |
ClinGen | rs3130544 |
ebi | rs3130544 |
HLI | rs3130544 |
Exac | rs3130544 |
Gnomad | rs3130544 |
Varsome | rs3130544 |
LitVar | rs3130544 |
Map | rs3130544 |
PheGenI | rs3130544 |
Biobank | rs3130544 |
1000 genomes | rs3130544 |
hgdp | rs3130544 |
ensembl | rs3130544 |
geneview | rs3130544 |
scholar | rs3130544 |
rs3130544 | |
pharmgkb | rs3130544 |
gwascentral | rs3130544 |
openSNP | rs3130544 |
23andMe | rs3130544 |
SNPshot | rs3130544 |
SNPdbe | rs3130544 |
MSV3d | rs3130544 |
GWAS Ctlg | rs3130544 |
GMAF | 0.03719 |
Max Magnitude | 0 |
? | (A;A) (A;C) (C;C) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 23263863] |
Trait | Hematology traits |
Title | GWAS of blood cell traits identifies novel associated loci and epistatic interactions in Caucasian and African-American children. |
Risk Allele | A |
P-val | 5E-7 |
Odds Ratio | .02 [0.011-0.026] unit decrease |
GWAS snp | |
---|---|
PMID | [PMID 23055271] |
Trait | Myasthenia gravis |
Title | Risk for myasthenia gravis maps to a (151) Pro→Ala change in TNIP1 and to human leukocyte antigen-B*08. |
Risk Allele | A |
P-val | 2E-90 |
Odds Ratio | 5.64 [4.77-6.67] |
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
[PMID 20017995] A principal-components-based clustering method to identify multiple variants associated with rheumatoid arthritis and arthritis-related autoantibodies.
[PMID 20064070] Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d